Journal articles

Journal articles

  • I Donoso, D García, D Martínez, JM Tylianakis, DB Stouffer. Complementary effects of species abundances and ecological neighborhood on the occurrence of fruit-frugivore interaction. Frontiers in Ecology and Evolution (accepted).
    [journal]

  • A Lustig, DB Stouffer, C Doscher, SP Worner. Landscape metrics as a framework to measure the effect of landscape structure on the spread of invasive insect species. Landscape Ecology (accepted).
    [journal]

  • T Poisot, DB Stouffer. Interactions retain the co-phylogenetic matching that communities lost. Oikos (in press).
    [journal]

  • MC Hutchinson, EF Cagua, DB Stouffer. Cophylogenetic signal is detectable in pollination interactions across ecological scales. Ecology 98(10), 2640–2652 (2017).
    [journal] [pdf]

  • AR Cirtwill, C Lagrue, R Poulin, DB Stouffer. Host taxonomy constrains the properties of trophic transmission routes for parasites in lake food webs. Ecology 98(9), 2401–2412 (2017).
    [journal] [pdf]

  • A Lustig, SP Worner, JPW Pitt, C Doscher, DB Stouffer, SD Senay. A modelling framework for the establishment and spread of invasive species in heterogeneous environments. Ecology and Evolution 7(20), 8338–8348 (2017).
    [journal] [pdf]

  • MC Hutchinson, EF Cagua, JA Balbuena, DB Stouffer, T Poisot. paco: implementing Procrustean Approach to Cophylogeny in R. Methods in Ecology & Evolution 8(8), 932–940 (2017).
    [journal] [pdf]

  • E Delmas, U Brose, D Gravel, DB Stouffer, T Poisot. Simulations of biomass dynamics in community food webs. Methods in Ecology & Evolution 8(7), 881–886 (2017).
    [journal] [pdf]

  • MM Mayfield, DB Stouffer. Higher-order interactions capture unexplained complexity in diverse communities. Nature Ecology & Evolution 1, 0062 (2017).
    [journal] [pdf]

  • O Godoy, DB Stouffer, NJB Kraft, JM Levine. Intransitivity is infrequent and fails to promote annual plant coexistence without pairwise niche differences. Ecology 98(5), 1193–1200 (2017).
    [journal] [pdf]

  • T Poisot, DB Stouffer, S Kéfi. Describe, understand and predict: why do we need networks in ecology? Functional Ecology 30(12), 1878–1882 (2016).
    [journal] [pdf]

  • KL Wootton, DB Stouffer. Species' traits and food-web complexity interactively affect a food web's response to press disturbance. Ecosphere 7(11), e01518 (2016).
    [journal] [pdf]

  • AR Cirtwill, DB Stouffer. Knowledge of predator-prey interactions improves predictions of immigration and extinction in island biogeography. Global Ecology and Biogeography 25(7), 900–911 (2016).
    [journal] [pdf]

  • KL Wootton, DB Stouffer. Many weak interactions and few strong; food-web feasibility depends on the combination of the strength of species' interactions and their correct arrangement. Theoretical Ecology 9(2), 185–195 (2016).
    [journal] [pdf]

  • T Poisot, D Gravel, S Leroux, SA Wood, M-J Fortin, B Baiser, AR Cirtwill, MB Araújo, DB Stouffer. Synthetic datasets and community tools for the rapid testing of ecological hypotheses. Ecography 39(4), 402–408 (2016).
    [journal] [pdf]

  • T Poisot, AR Cirtwill, K Cazelles, D Gravel, M-J Fortin, DB Stouffer. The structure of probabilistic networks. Methods in Ecology & Evolution 7(3), 303–312 (2016).
    [journal] [pdf]

  • GV Dalla Riva, DB Stouffer. Exploring the evolutionary signature of food webs' backbones using functional traits. Oikos 125(5), 446–456 (2016).
    [journal] [pdf]

  • A Eklöf, DB Stouffer. The phylogenetic component of food-web structure and intervality. Theoretical Ecology 9(1), 107–115 (2016).
    [journal] [pdf]

  • T Poisot, B Baiser, JA Dunne, S Kéfi, F Massol, N Mouquet, TN Romanuk, DB Stouffer, SA Wood, D Gravel. mangal - making complex ecological network analysis simple. Ecography 39(4), 384–390 (2016).
    [journal] [pdf]

  • JA Thia, ML Hale, DB Stouffer, HM Chapman. Limited dispersal into appropriate microhabitats likely explains recruitment failure in a chimpanzee-dependent tree species. African Journal of Ecology 54(1), 121–124 (2016).
    [journal] [pdf]

  • AR Cirtwill, DB Stouffer, R Poulin, C Lagrue. Are parasite richness and abundance linked to prey species richness and individual feeding preferences in fish hosts? Parasitology 143(1), 75–86 (2016).
    [journal] [pdf]

  • AR Cirtwill, DB Stouffer, TN Romanuk. Latitudinal gradients in biotic niche breadth vary across ecosystem types. Proceedings of the Royal Society of London B 282(1819), 20151589 (2015).
    [journal] [pdf]

  • A Lustig, DB Stouffer, M Roigé, SP Worner. Towards more predictable and consistent landscape metrics across spatial scales. Ecological Indicators 57, 11–21 (2015).
    [journal] [pdf]

  • AR Cirtwill, DB Stouffer. Concomitant predation on parasites is highly variable but constrains the ways in which parasites contribute to food-web structure. Journal of Animal Ecology 84(3), 734–744 (2015).
    [journal] [pdf]

  • T Poisot, DB Stouffer, D Gravel. Beyond species: why ecological interaction networks vary through space and time. Oikos 124(3), 243–251 (2015).
    [journal] [pdf]

  • NJ Baker, R Kaartinen, T Roslin, DB Stouffer. Species' roles in food webs show fidelity across a highly variable oak forest. Ecography 38(2), 130–139 (2015).
    [journal] [pdf]

  • DB Stouffer, AR Cirtwill, J Bascompte. How exotic plants integrate into pollination networks. Journal of Ecology 102(6), 1442–1450 (2014).
    [journal] [pdf]

  • JE Lavabre, DB Stouffer, R Sanz, J Bascompte. Seed dispersal in heterogeneous landscapes: linking field observations with spatially explicit models. Oikos 123(11), 1355–1364 (2014).
    [journal] [pdf]

  • D García, D Martínez, DB Stouffer, JM Tylianakis. Exotic birds increase generalization and compensate for native bird decline in plant-frugivore assemblages. Journal of Animal Ecology 83(6), 1441–1450 (2014).
    [journal] [pdf]

  • S Saavedra, DB Stouffer. "Disentangling nestedness" disentangled. Nature 500(7463), E1–E3 (2013).
    [journal] [pdf]

  • H Tomimatsu, T Sasaki, H Kurokawa, JR Bridle, C Fontaine, DB Stouffer, M Vellend, M Bezemer, T Fukami, E Hadly, MGA van der Heijden, M Kawata, S Kéfi, NJB Kraft, KS McCann, PJ Mumby, T Nakashizuka, OL Petchey, TN Romanuk, KN Suding, G Takimoto, J Urabe, S Yachi. Sustaining ecosystem functions in a changing world: a call for an integrated approach. Journal of Applied Ecology 50(5), 1124–1130 (2013).
    [journal] [pdf]

  • JA Dunne, KD Lafferty, AP Dobson, RF Hechinger, AM Kuris, ND Martinez, JP McLaughlin, KN Mouritsen, R Poulin, K Reise, DB Stouffer, DW Thieltges, RJ Williams, CD Zander. Parasites affect food web structure primarily through increased diversity and complexity. PLoS Biology 11(6), e1001579 (2013).
    [journal] [pdf]

  • RM Thompson, U Brose, JA Dunne, RO Hall, S Hladyz, RL Kitching, ND Martinez, H Rantala, T Romanuk, DB Stouffer, JM Tylianakis. Food webs: Reconciling the structure and function of biodiversity. Trends in Ecology and Evolution 27(12), 689–697 (2012).
    [journal] [pdf]

  • DB Stouffer, M Sales-Pardo, MI Sirer, J Bascompte. Evolutionary conservation of species' roles in food webs. Science 335(6075), 1489–1492 (2012).
    [journal] [pdf]

  • AM Poole, DB Stouffer, JM Tylianakis. 'Ecosystomics': ecology by sequencer. Trends in Ecology and Evolution 27(6), 309–310 (2012).
    [journal] [pdf]

  • S Saavedra*, DB Stouffer*, B Uzzi, J Bascompte. Strong contributors to network persistence are the most vulnerable to extinction. Nature 478(7368), 233–235 (2011).
    [journal] [pdf]

  • DB Stouffer, EL Rezende, LAN Amaral. The role of body mass in diet contiguity and food-web structure. Journal of Animal Ecology 80(3), 632–639 (2011).
    [journal] [pdf]

  • DB Stouffer, J Bascompte. Compartmentalization increases food-web persistence. Proceedings of the National Academy of Sciences USA 108(9), 3648–3652 (2011).
    [journal] [pdf]

  • R Guimerà, DB Stouffer, M Sales-Pardo, EA Leicht, MEJ Newman, LAN Amaral. Origin of compartmentalization in food webs. Ecology 91(10), 2941–2951 (2010).
    [journal] [pdf]

  • MA Fortuna, DB Stouffer, JM Olesen, P Jordano, D Mouillot, BR Krasnov, R Poulin, J Bascompte. Nestedness versus modularity in ecological networks: two sides of the same coin? Journal of Animal Ecology 79(4), 811–817 (2010).
    [journal] [pdf]

  • DB Stouffer, J Bascompte. Understanding food-web persistence from local to global scales. Ecology Letters 13(2), 154–161 (2010).
    [journal] [pdf]

  • DB Stouffer. Scaling from individuals to networks in food webs. Functional Ecology 24(1), 44–51 (2010).
    [journal] [pdf]

  • RD Malmgren, DB Stouffer, ASLO Campanharo, LAN Amaral. On universality in human correspondence activity. Science 325(5948), 1696–1700 (2009).
    [journal] [pdf]

  • J Bascompte, DB Stouffer. The assembly and disassembly of ecological networks. Philosophical Transactions of the Royal Society of London B 364(1524), 1781–1787 (2009).
    [journal] [pdf]

  • RD Malmgren, DB Stouffer, A Motter, LAN Amaral. A Poissonian explanation for heavy tails in e-mail communication. Proceedings of the National Academy of Sciences USA 105(47), 18153–18158 (2008).
    [journal] [pdf]

  • DB Stouffer, CA Ng, LAN Amaral. Ecological engineering and sustainability: A new opportunity for chemical engineering. AIChE Journal 54(12), 3040–3047 (2008).
    [journal] [pdf]

  • DB Stouffer, J Camacho, W Jiang, LAN Amaral. Evidence for the existence of a robust pattern of prey selection in food webs. Proceedings of the Royal Society of London B 274(1621), 1931–1940 (2007).
    [journal] [pdf]

  • J Camacho, DB Stouffer, LAN Amaral. Quantitative analysis of the local structure of food webs. Journal of Theoretical Biology 246(2), 260–268 (2007).
    [journal] [pdf]

  • DB Stouffer, J Camacho, LAN Amaral. A robust measure of food web intervality. Proceedings of the National Academy of Sciences USA 103(50), 19015–19020 (2006).
    [journal] [pdf]

  • DB Stouffer, J Camacho, R Guimerà, CA Ng, LAN Amaral. Quantitative patterns in the structure of model and empirical food webs. Ecology 86(5), 1301–1311 (2005).
    [journal] [pdf]

Book chapters

Book chapters

  • DB Stouffer, MA Fortuna, J Bascompte
    Ideas for moving beyond structure to dynamics of ecological networks.
    in S Boccaletti, V Latora, and Y Moreno (eds.), Handbook on Biological Networks. World Scientific Publishing Company, Singapore, pp. 307–328 (2008).
    [publisher]